| National Institute of Foundry and Forge Technology | jharkhand | 93 | |
| National Institute of Health and Family Welfare | delhi | 63 | |
| National Institute Of High Security Animal Diseases | madhya pradesh | 19 | |
| National Institute of Homoeopathy | west bengal | 104 | |
| National Institute of Hydrology | uttarakhand | 17 | |
| National Institute of Immunohaematology | maharashtra | 9 | |
| National Institute of Immunology | delhi | 22 | |
| National Institute Of Indian Medical Heritage | telangana | 40 | |
| National Institute of Industrial Engineering | maharashtra | 45 | |
| National Institute of Malaria Research | goa | 16 | |
| National Institute of Malaria Research | karnataka | 9 | |
| National Institute of Malaria Research | assam | 12 | |
| National Institute of Malaria Research | delhi | 102 | |
| National Institute of Malaria Research | jharkhand | 2 | |
| National Institute of Malaria Research | gujarat | 1 | |
| National Institute of Malaria Research | punjab | 27 | |
| National Institute of Medical Statistics Indian Council of Medical Research | delhi | 4 | |
| National Institute of Mental Health and Neuro Sciences | karnataka | 806 | |
| National Institute Of Miners Health | rajasthan | 7 | |
| National Institute of Nutrition | telangana | 57 | |
| National Institute of Occupational Health | gujarat | 38 | |
| National Institute of Oceanography | goa | 3 | |
| National Institute Of Open Schooling | uttar pradesh | 87 | |
| National Institute Of Pathology | delhi | 2 | |
| National Institute Of Pharmaceutical Education And Research | telangana | 1 | |